442 in the window; the type tabs sum to fewer — some papers are unclassified.
ICONIC: An R Package for Integrating Instrumental Variable- and Negative-Control-Informed Causal Discovery and Diagnostics in Multiomic Studies
1d ·
Bresnahan, S. T., Xiong, C., Head, T., et al.
· medrxiv
biomedical
code
benchmarked
top 1% noveltop 1% open
Surfaced because: open code, benchmarked against baselines.
Temporal, genome-scale analysis of Myxococcus xanthus developmental fate in a mixed population
1d ·
Mittal, S., Mandal, S., Farrugia, M. A., et al.
· biorxiv
top 1% novel
Surfaced because: matches the platform's topic region.
HESTIA: Scalable Multimodal Integration of Histology and High-Resolution Spatial Transcriptomics for Robust Spatial Domain Identification
1d ·
Zhong, Z., Zhu, X., Guo, J., et al.
· biorxiv
method development
benchmarked
top 2% open
Surfaced because: benchmarked against baselines.
In vivo multimodal lineage tracing of mammalian development by DeepTrack barcoding
1d ·
Guo, C., Jiang, J., Wang, X., et al.
· biorxiv
Surfaced because: matches the platform's topic region.
A self-supervised DNA foundation model with collapse-resistant multimodal fusion
1d ·
Chen, Y.
· biorxiv
method development
benchmarked
top 2% open
Surfaced because: benchmarked against baselines.
Beyond Viral Load: A Mechanistic Model of Virus-Immune Dynamics and Age-Dependent Influenza Severity
1d ·
Johnson, R., Neujahr, H., Blanco, R., et al.
· biorxiv
top 2% novel
Surfaced because: matches the platform's topic region.
Ratiometric growth-rate control enables robust coexistence in competing microbial consortia
1d ·
Barajas, C.
· biorxiv
top 6% novel
Surfaced because: matches the platform's topic region.
Accurate and efficient prediction of protein conformations with ProtMonomer
1d ·
Si, Y., Zhang, S., Chen, L.
· biorxiv
method development
benchmarked
top 2% open
Surfaced because: benchmarked against baselines.
Spatial agent-based modeling and interpretable machine learning identify determinants of combination-therapy response in HER2-heterogeneous breast cancer
1d ·
Rahman, N., Jackson, T. L.
· biorxiv
biomedical
top 5% novel
Surfaced because: matches the platform's topic region.
A conditional, myeloid-cell specific estrogen receptor α deletion reprograms the liver immune microenvironment and impedes the growth of colon carcinoma liver metastases
1d ·
Hacariz, O., Kalaw, M., Yang, Q., et al.
· biorxiv
biomedical
top 3% novel
Surfaced because: matches the platform's topic region.
Generation and characterization of a patient-specific human induced pluripotent stem cell line from a Skogholt syndrome patient (ASCFi003-A)
1d ·
Przybyla, W., Gupta, S., Fjerdingstad, H. B., et al.
· biorxiv
top 9% novel
Surfaced because: matches the platform's topic region.
Age-related clonal hematopoiesis and mosaic sex chromosome loss define distinct systemic proteomic programs and disease vulnerabilities
1d ·
Weyrich, M., Ware, A., Steixner-Kumar, A., et al.
· medrxiv
biomedical
top 10% novel
Surfaced because: matches the platform's topic region.
A 515,579-Genome Reference Panel Improves Rare-Variant Imputation Across Multiple Underrepresented Populations
1d ·
Ivankovic, F., Ko, A., Aster, M. M., et al.
· medrxiv
Surfaced because: matches the platform's topic region.
BTRR complex deficiency is a driver for genomic instability in Bloom syndrome
1d ·
Gönenc, I. I., Wolff, A., Busley, A. V., et al.
· biorxiv
discovery
top 4% novel
Surfaced because: matches the platform's topic region.
Sequential Proofreading Enhances Specificity and Potency of CRISPR-CasX-based Epigenetic Repressors
1d ·
Charles, E. J., White, R., Tran, R. V., et al.
· biorxiv
discovery
Surfaced because: matches the platform's topic region.
Magnetic Fields Improves the Cellular function in Hyperglycaemia
1d ·
Mukherjee, B., Chandra, S., Salam, A., et al.
· biorxiv
discovery
top 6% novel
Surfaced because: matches the platform's topic region.
Spatial transcriptomics reveals site-specific cellular and metabolic heterogeneity in bladder carcinoma in situ
1d ·
Myers, T., Salmasi, A., Meagher, M. F., et al.
· biorxiv
Surfaced because: matches the platform's topic region.
Multiple mechanisms regulate the nanoscale organization of PD-L1 at the cell surface
1d ·
Franken, G. A., Arp, A. B., Cerina, D., et al.
· biorxiv
Surfaced because: matches the platform's topic region.
Myelonets define spatiotemporal immunosuppressive programs in ovarian cancer
1d ·
Niemiec, I., Shabanova, A., Ruuska, E., et al.
· medrxiv
Surfaced because: matches the platform's topic region.
Organoid transplantation in the adult endometrium restores fertility and uncovers epithelial lineage plasticity
1d ·
Mopure, D., Kim, H. I., Ang, C. J., et al.
· biorxiv
Surfaced because: matches the platform's topic region.
RedFuMOS: A novel approach for multi-omics and clinical data-driven patient stratification
1d ·
De Luca, S., Fava, C., Rizzo, G., et al.
· medrxiv
code
benchmarked
top 1% open
Surfaced because: open code, benchmarked against baselines.
Calibrated Variant Effect Prediction at the Residue Level Using Conditional Score Distributions
1d ·
Passi, G., Amittai, S., Schneidman-Duhovny, D.
· biorxiv
benchmarked
top 2% open
Surfaced because: benchmarked against baselines.
Metastatic founder cell candidates resemble preimplantation embryonic blastomeres
1d ·
Klein, C. A., Koerkel-Qu, H., Raya, E., et al.
· biorxiv
Surfaced because: matches the platform's topic region.
JMod: Joint modeling of mass spectra for empowering multiplexed DIA proteomics
1d ·
McDonnell, K., Geiszler, D. J., Wamsley, N., et al.
· biorxiv
Surfaced because: matches the platform's topic region.
Prioritizing peptides for targeted mass spectrometry experiments using deep learning
1d ·
Sonthalia, S., Wen, B., Dasgupta, P., et al.
· biorxiv
benchmarked
top 2% open
Surfaced because: benchmarked against baselines.
Transient reprogramming limits AP-1-associated chromatin opening and transposable element activation to preserve hematopoietic stem cell function during aging and stress
1d ·
PORQUET, A., BOHM, M., Ait-Ougouram, H., et al.
· biorxiv
discovery
Surfaced because: matches the platform's topic region.
WITHDRAWN: MedOS: AI-XR-Cobot World Model for Clinical Perception and Action
1d ·
Wu, Y. C., Yin, M., Shi, B., et al.
· medrxiv
Surfaced because: matches the platform's topic region.
Single-Cell Inference of Structural States Of Ribosomes
1d ·
Joly-Smith, E., VanInsberghe, M., Sarieva, K., et al.
· biorxiv
Surfaced because: matches the platform's topic region.
Network-based meta-analysis maps stage-dependent molecular programs in MASLD through MASLD-META NETWORK application
1d ·
Kumak, E., Darde, T., Konu, O.
· biorxiv
Surfaced because: matches the platform's topic region.
Universal physical principles of protein structural genesis emerge in language-model representation space
1d ·
Chuanyang, L., Liu, J., Qiu, X., et al.
· biorxiv
method development
Surfaced because: matches the platform's topic region.